Zhe Li

On Oct 22, 2009

graduated from CBI in July 2009 (Ph.D. 2002-2009)

  • Jin J, He K, Tang X, Li Z, Lv L, Zhao Y, Luo J,Kong L, Gao G. An Arabidopsis transcriptional regulatory map reveals distinct functional and evolutionary features of novel transcription factors. Mol Biol Evol. 2015 Mar 6. pii: msv058.
  • Zhao Y, Tang L, Li Z, Jin J, Luo J, Gao G. Identification and analysis of unitary loss of long-established protein-coding genes in Poaceae shows evidences for biased gene loss and putatively functional transcription of relics. BMC Evol Biology. 2015 15:66
  • Li Zhang
  • Tang X, Hou M, Ding Y, Li ZH, Ren LC, Gao G. Systematically profiling and annotating long intergenic non-coding RNAs in human embryonic stem cell. BMC Genomics 2013, 14(Suppl 5):S3
  • Wang J, Kong L, Zhao S, Zhang H, Tang L, Li Z, Gu X, Luo J, Gao G. Rice-Map: a new-generation rice genome browser. BMC Genomics. 2011 Mar 30;12:165.
  • Liu X, Li Z, Jiang Z, Zhao Y, Peng J, Jin J, Guo H, Luo J. LSD: a leaf senescence database. Nucleic Acids Res. 2011 Jan;39(Database issue):D1103-7
  • Li Z, Zhang H, Ge S, Gu X, Gao G, Luo J. Expression pattern divergence of duplicated genes in rice. BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S8
  • Zheng Li, Min Liu, Li Zhang, Wenxia Zhang, Ge Gao, Zuoyan Zhu, Liping Wei, Qichang Fan, and Manyuan Long, Detection of intergenic non-coding RNAs expressed in the main developmental stages in Drosophila melanogaster., Nucleic Acids Research, May 18, 2009;
  • Liu X, Wu J, Wang J, Liu X, Zhao S, Li Z, Kong L, Gu X, Luo J, Gao G., WebLab: a data-centric, knowledge-sharing bioinformatic platform., Nucleic Acids Research, doi:10.1093/nar/gkp428
  • Gao G, Vibranovski MD, Zhang L, Li Z, Liu M, Zhang YE, Li X, Zhang W, Fan Q, VanKuren NW, Long M, Wei L. A long-term demasculinization of X-linked intergenic noncoding RNAs in Drosophila melanogaster. Genome Res. 2014 Apr;24(4):629-38.doi: 10.1101/gr.1658
  • Shi X, Wang X, Li Z, Zhu Q, Tang W, Ge S, Luo J: Nucleotide substitution pattern in rice paralogues: implication for negative correlation between the synonymous substitution rate and codon usage bias. Gene 2006, 376(2):199-206